Articles
Almeida, M.M., Cabrita, E., Laizé, V., Brionne, A., Labbé, C., Fatsini, E. 2024. Cryopreservation did not affect spermatogonia global methylation profile in Senegalese sole (Solea senegalensis). Cryobiology 118:105162 [DOI]
Amichaud, O., Lafond, T., Fazekas, G.L., Kleiber, A., Kerneis, T., Batard, A., Goardon, L., Labbé, L., Lambert, S., Milla, S., Colson, V. 2024. Air bubble curtain improves the welfare of captive rainbow trout fry and fingerlings. Aquculture 586: 740828 [DOI]
Cheng, Y., Zhang, S., Nayak, R., Vechtova, P., Schumacher, F., Linhartova, P., Gazo, I., Linhartova, Z., Waghmare, S.G., Kleuser, B., Dey, A., Rodinova, V., Rodina, M., Sterba, J., Alavi, S.M.H., Labbe, C., Linhart, O. 2024. Fertilization by short-term stored sperm alters DNA methylation patterns at single-base resolution in common carp (Cyprinus carpio) embryos. Reviews in Fish Biology and Fisheries In press [DOI]
Degrande, R., Amichaud, O., Piégu, B., Cornilleau, F., Jardat, P., Ferreira, V.H.B., Colson, V., Lansade, L., Calandreau, L. 2024. Transitive reasoning in the adult domestic hen in a six-term series task. Animal Cognition 27(1):77 [DOI]
El Kamouh, M., Brionne, A., Sayyari, A., Lallias, D., Labbé, C., Laurent, A. 2024. Strengths and limitations of reduced representation bisulfite sequencing (RRBS) in the perspective of DNA methylation analysis in fish: a case-study on rainbow trout spermatozoa. Fish Physiology and Biochemistry 50(5):2067-2082 [DOI]
Frohn, L., Peixoto, D., Guyomar, C., Teixeira, C., Aguirre, P., Haddad, S.M., Bobe, J., Costas, B., Richard, N. Pinel, K., Skiba-Cassy, S. 2024. Yeast extract improves growth in rainbow trout (Oncorhynchus mykiss) fed a fishmeal-free diet and modulates the hepatic and distal intestine transcriptomic profile. Aquaculture 579: 740226 [DOI]
Frohn, L., Peixoto, D., Terrier, F., Costas, B., Bugeon, J., Cartier, C., Richard, N., Pinel, K., Skiba-Cassy, S. 2024. Gut physiology of rainbow trout (Oncorhynchus mykiss) is influenced more by short-term fasting followed by refeeding than by feeding fishmeal-free diets. Fish Physiology and Biochemistry 50(3):1281-1303 [DOI]
Goffette, V., Sabin, N., Bugeon, J., Jagot, S., Hue, I., Gabillard, J.C. 2024. Mature adipocytes inhibit differentiation of myogenic cells but stimulate proliferation of fibro-adipogenic precursors derived from trout muscle in vitro. Scientific Reports 14(1):16422 [DOI]
Gueho, A., Żarski, D., Rime, H., Guével, B., Com, E., Lavigne, R., Nguyen, T., Montfort, J., Pineau, C., Bobe, J. 2024. Evolutionarily conserved ovarian fluid proteins are responsible for extending egg viability in salmonid fish. Scientific Reports 14(1): 9651 [DOI]
Hervas-Sotomayor, F., Murat, F. 2024. Gene duplication contributes to liver evolution. Nature Ecology & Evolution In press [DOI]
Janati-Idrissi, S., de Abreu, M.R., Guyomar, C., de Mello, F., Nguyen, T., Mechkouri, N., Gay, S., Montfort, J., Gonzalez, A.A., Abbasi, M., Bugeon, J., Thermes, V., Seitz, H., Bobe, J. 2024. Looking for a needle in a haystack: de novo phenotypic target identification reveals Hippo pathway-mediated miR-202 regulation of egg production. Nucleic Acids Research 52(2): 738-754 [DOI]
Johnston, I.A., Kent, M.P., Boudinot, P., Looseley, M., Bargelloni, L., Faggion, S., Merino, G.A., Ilsley, G.R., Bobe, J., Tsigenopoulos, C.S., Robertson, J., Harrison, P.W., Martinez, P., Robledo, D., Macqueen, D.J., Lien, S. 2024. Advancing fish breeding in aquaculture through genome functional annotation. Aquaculture 583, 740589 [DOI]
Jordan-Ward, R., von Hippel, F.A., Sancho Santos, M.E., Wilson, C.A., Maldonado, Z.R., Dillon, D., Titus, T., Gardell, A., Salamova, A., Postlethwait, J.H., Contreras, E., Capozzi, S.L., Panuwet, P., Parrocha, C., Bremiller, R., Guiguen, Y., Gologergen, J., Immingan, T., Miller, P., Carpenter, D., Buck, C.L. 2024. Transcriptomic and developmental effects of persistent organic pollutants in sentinel fishes collected near an arctic formerly used defense site. Environmental Pollution 356:124283 [DOI]
Kleiber, A., Roy, J., Brunet, V., Baranek, E., Le-Calvez, J.M., Kerneis, T., Batard, A., Calvez, S., Pineau, L., Milla, S., Guesdon, V., Calandreau, L., Colson, V. 2024. Feeding predictability as a cognitive enrichment protects brain function and physiological status in rainbow trout: a multidisciplinary approach to assess fish welfare. Animal 18(3):101081 [DOI]
Kuhl, H., Euclide, P.T., Klopp, C., Cabau, C., Zahm, M., Lopez-Roques, C., Iampietro, C., Kuchly, C., Donnadieu, C., Feron, R., Parrinello, H., Poncet, C., Jaffrelo, L., Confolent, C., Wen, M., Herpin, A., Jouanno, E., Bestin, A., Haffray, P., Morvezen, R., de Almeida, T.R., Lecocq, T., Schaerlinger, B., Chardard, D., Żarski, D., Larson, W.A., Postlethwait, J.H., Timirkhanov, S., Kloas, W., Wuertz, S., Stöck, M., Guiguen, Y. 2024. Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC Biology 22(1):141 [DOI]
Labeille, M., Devaux, A., Lefrancois, E., Abbaci, K., Santos, R., Besnard, A., Bony, S., Lareyre, J.J., Teichert, N. 2024. Variation in reproductive strategies of two amphidromous gobies of the West Indies: Sicydium plumieri and Sicydium punctatum. Hydrobiologia in press [DOI]
Lareyre, J.J., Monget, P. 2024. A missing paradigm: deciphering endocrine innovations among diverging regulations of alleles, paralogous and orthologous genes. Journal of Molecular Endocrinology In press [DOI]
Lefèvre, F., Bugeon, J., Goardon, L., Kernéis, T., Labbé, L., Panserat, S., Médale, F., Quillet, E. 2024. Seven generations of selection for muscle fat content greatly affect rainbow trout flesh quality and muscle fiber size. Aquaculture Reports 38: 102343 [DOI]
Montfort, J., Hervas-Sotomayor, F., Le Cam., A, Murat, F. 2024. FEVER: an interactive web-based resource for evolutionary transcriptomics across fishes. Nucleic Acids Research 52(W1):W65-W69 [DOI]
Nayak, R., Franěk, R., Laurent, A., Pšenička, M. 2024. Genome-wide comparative methylation analysis reveals the fate of germ stem cells after surrogate production in teleost. BMC Biology 22(1):39 [DOI]
Nynca, J., Bobe, J., Król, J., Ljubobratovic, U., Palinska-Zarska, K., Malinowska, A., Swiderska, B., Zarski, D. 2024. Early postovulatory aging reveals the first proteomic markers of egg quality in pikeperch. Aquaculture 593: 741270 [DOI]
Parey, E., Berthelot, C., Roest Crollius, H., Guiguen, Y. 2024. Solving an enigma in the tree of life, at the origins of teleost fishes. Comptes Rendus. Biologies 347: 1-8 [DOI]
Piégu, B., Lefort, G., Douet, C., Milhes, M., Jacques, A., Lareyre, J.J., Monget, P., Fouchécourt, S. 2024. A first complete catalog of highly expressed genes in eight chicken tissues reveals uncharacterized gene families specific for the chicken testis. Physiological Genomics 56(6): 445-456 [DOI]
Prache, S., Lebret, B., Baéza, E., Martin, B., Gautron, J., Médale, F., Corraze, G., Van Baelen, C., Raulet, M., Lefèvre, F., Verrez-Bagnis, V., Sans, P. 2024. Quality and authentication of organic vs conventional animal products. INRAE Productions Animales 37(2): 8264 [DOI]
Rallière, C., Jagot, S., Sabin, N., Gabillard, J.C. 2024. Dynamics of pax7 expression during development, muscle regeneration, and in vitro differentiation of satellite cells in rainbow trout (Oncorhynchus mykiss). PLoS One 19(5):e0300850 [DOI]
Rumeau, M., Fenaille, F., Girard, A., Loux, V., Ba, M., Nédellec, C. Deléger, L., Bossy, R., Aubin, S., Knudsen, C., Combes, S. 2024. MilkOligoThesaurus, a dataset of mammalian milk oligosaccharide synonyms. Data in Brief 54 110404 [DOI]
Sayyari, A., Krogenæs, A.K., Mayer, I., Labbé, C. 2024. Sperm handling and management in the teleost model fish Japanese medaka (Oryzias latipes). Scientif Reports 14(1):14736 [DOI]
Schnebert, S., Vélez, E.J., Goguet, M., Dias, K., Veron, V., García-Pérez, I., Radler, L.M., Cardona, E., Fontagné-Dicharry, S., Van Delft, P., Dittrich-Domergue, F., Bernard, A., Beaumatin, F., Herpin, A., Cleveland, B., Seiliez, I. 2024. Chaperone-mediated autophagy in fish: A key function amid a changing environment. Autophagy Reports 3 (1) [DOI]
Sepp, M., Leiss, K., Murat, F., Okonechnikov, K., Joshi, P., Leushkin, E., Spänig, L., Mbengue, N., Schneider, C., Schmidt, J., Trost, N., Schauer, M., Khaitovich, P., Lisgo, S., Palkovits, M., Giere, P., Kutscher, L.M., Anders, S., Cardoso-Moreira, M., Sarropoulos, I., Pfister, S.M., Kaessmann, H. 2024. Cellular development and evolution of the mammalian cerebellum. Nature 625(7996): 788-796 [DOI]
Souza-Borges, C.H., Utsunomia, R., Varani, A.M., Uliano-Silva, M., Lira, L.V.G., Butzge, A.J., Gomez Agudelo, J.F., Manso, S., Freitas, M.V., Ariede, R.B., Mastrochirico-Filho, V.A., Penaloza, C., Barria, A., Porto-Foresti, F., Foresti, F., Hattori, R., Guiguen, Y., Houston, R.D., Hashimoto, D.T. 2024. De novo assembly and characterization of a highly degenerated ZW sex chromosome in the fish Megaleporinus macrocephalus. Gigascience 13:giae085 [DOI]
Vélez, E.J., Schnebert, S., Goguet, M., Balbuena-Pecino, S., Dias, K., Beauclair, L., Fontagné-Dicharry, S., Véron, V., Depincé, A., Beaumatin, F., Herpin, A., Seiliez, I. 2024. Chaperone-mediated autophagy protects against hyperglycemic stress. Autophagy 20(4): 752-768 [DOI]
Xue, L., Gao, Y., Zhang, S., Weng, M., Zeng, G., Chen, J., Liao, M., Alavi, S.M.H., Guiguen, Y. 2024. Expression pattern of the fused in sarcoma gene and its contextual influence on the density-specific response of the growth hormone/insulin-like growth factor 1 axis in zig-zag eels (Mastacembelus armatus). Frontiers in Marine Science 11:1461451 [DOI]
Yilmaz, O, Sullivan, C.V., Bobe, J., Norberg, B. 2024. The role of multiple vitellogenins in early development of fishes. General and Comparative Endocrinology 351: 114479 [DOI]
